Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_278 ID=scaffold_278-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  8734

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
143--212
3
23.3
3
86
0
95
61
1
4
32
1.24
248--324
30
2.6
28
70
11
73
57
10
18
14
1.65
1814--2792
50
19.6
49
70
10
540
22
19
25
32
1.98
1828--2875
100
10.5
100
85
3
1060
22
19
25
32
1.97
4183--4226
6
7.0
6
90
10
70
0
18
0
81
0.68
4183--4226
13
3.5
12
90
9
70
0
18
0
81
0.68
4254--4280
7
3.9
7
100
0
54
11
0
0
88
0.50

Tables:   1

The End!