Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_283 ID=scaffold_283-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  8894

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2176--2470
40
7.2
40
81
8
371
22
21
25
31
1.98
2174--2470
82
3.6
82
95
0
531
21
21
25
31
1.98
2921--3102
95
1.9
97
93
2
314
31
21
17
29
1.96
3123--3314
46
4.3
46
64
16
123
32
24
17
25
1.97
2786--3236
231
2.0
231
93
1
780
30
22
18
27
1.98
3018--3428
134
3.1
135
91
4
663
29
24
19
26
1.98
3451--3671
42
5.2
41
65
20
130
24
21
25
27
1.99
3378--3769
86
4.5
86
91
0
606
26
23
23
26
2.00
3493--3715
41
5.2
44
64
20
128
27
23
23
25
2.00
4732--4774
12
3.8
11
81
12
52
4
11
2
81
0.93
4730--4772
22
2.0
22
90
9
70
4
11
2
81
0.93
5215--5290
33
2.5
29
80
18
91
1
9
9
80
0.97

Tables:   1

The End!