Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_299 ID=scaffold_299-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  8433

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2102--2126
4
6.2
4
100
0
50
72
0
0
28
0.86
2189--2224
15
2.5
15
86
4
56
0
13
0
86
0.58
2189--2224
14
2.6
13
87
12
54
0
13
0
86
0.58
2186--2226
13
3.2
13
83
13
57
0
19
0
80
0.71
2575--2618
19
2.2
20
80
4
54
0
27
0
72
0.85
2863--2918
25
2.4
23
77
16
62
1
7
14
76
1.07
3085--3206
30
4.1
29
75
7
95
44
3
18
34
1.66
3098--3231
30
4.5
29
80
6
135
44
2
17
36
1.61
3093--3231
60
2.3
59
81
1
161
42
2
19
35
1.66
5009--5037
13
2.1
14
93
6
51
34
0
0
65
0.93
5228--5348
3
40.3
3
98
0
233
33
0
0
66
0.98
6791--6887
43
2.3
42
83
7
115
24
22
16
36
1.94
7062--7672
61
10.2
61
71
9
290
41
15
9
33
1.78
7036--7665
92
7.0
92
82
6
664
41
15
8
33
1.78
7093--7369
152
1.8
154
81
3
353
42
15
8
33
1.77
7398--7672
31
9.0
31
73
9
197
41
15
9
33
1.79

Tables:   1

The End!