Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_31 ID=scaffold_31-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  66424

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21994--22066
29
2.4
31
82
11
89
34
6
16
42
1.75
23096--23131
17
2.1
17
89
0
54
25
8
22
44
1.80
23101--23140
17
2.4
17
86
0
53
30
12
17
40
1.86
23180--23230
18
2.8
18
78
0
57
31
11
11
45
1.77
29215--29265
25
2.0
25
100
0
102
27
33
23
15
1.95
35261--35331
8
8.9
8
81
9
65
80
8
0
11
0.91
35261--35333
9
7.9
9
83
10
60
79
8
0
12
0.93
35280--35337
18
3.4
16
86
11
80
77
10
0
12
0.99
36197--36237
9
4.9
9
88
11
61
75
0
12
12
1.05
36201--36237
8
4.6
8
87
12
58
78
0
10
10
0.97
36197--36246
24
2.1
23
92
3
82
72
0
14
14
1.14
36202--36237
16
2.3
16
95
4
65
77
0
11
11
0.99
37925--38151
44
5.2
44
67
8
165
27
25
22
23
2.00
37432--38201
87
8.8
87
90
0
924
27
24
24
23
2.00
38216--38398
95
1.9
95
92
4
307
31
18
20
30
1.96
38415--38652
128
1.9
128
92
0
404
27
18
25
28
1.98
38371--38626
44
5.9
44
72
12
197
28
17
25
27
1.98
48544--48582
19
2.1
19
95
0
69
20
28
15
35
1.93
53059--53110
24
2.1
25
86
10
72
11
42
1
44
1.51
57499--57537
2
19.5
2
100
0
78
48
0
0
51
1.00
59674--59748
32
2.4
31
84
6
98
34
6
16
42
1.74
60874--60924
18
2.8
18
78
0
57
31
11
11
45
1.77

Tables:   1

The End!