Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_325 ID=scaffold_325-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  8175

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1244--1336
40
2.3
38
85
10
123
33
20
24
21
1.97
1262--1358
40
2.4
40
87
3
142
38
20
21
19
1.94
1413--1549
41
3.3
41
95
0
238
25
21
27
25
1.99
1970--2003
14
2.3
15
95
5
61
38
0
26
35
1.57
2242--2287
7
6.6
7
97
0
83
2
0
56
41
1.11
2090--2252
89
1.8
89
89
2
256
26
1
28
42
1.63
2678--2711
16
2.1
16
88
5
50
70
2
2
23
1.15
3063--3128
22
3.0
23
78
8
68
25
46
3
24
1.66
7424--7650
43
5.3
43
87
1
287
19
17
32
30
1.95

Tables:   1

The End!