Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_348 ID=scaffold_348-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  8106

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4168--4208
20
2.0
20
90
0
64
12
12
7
68
1.39
5126--5166
21
2.0
20
90
4
64
68
0
17
14
1.22
5126--5166
7
6.0
7
78
16
50
68
0
17
14
1.22
5127--5166
13
3.0
13
89
10
55
67
0
17
15
1.23
5535--5559
13
1.9
13
100
0
50
12
24
8
56
1.62
6423--6992
50
11.4
50
69
5
346
30
21
24
24
1.99
6408--6967
100
5.6
100
96
0
985
29
21
24
24
1.99
6989--7144
44
3.5
44
65
8
102
28
21
23
26
1.99
7004--7184
88
2.1
88
95
2
328
28
20
24
27
1.99
7004--7207
88
2.3
88
90
1
266
28
20
25
26
1.99
7092--7339
132
1.9
132
93
3
428
27
19
25
27
1.99
7335--7495
44
3.6
44
77
9
193
31
15
23
29
1.95

Tables:   1

The End!