Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_358 ID=scaffold_358-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  7902

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1334--1761
40
10.3
41
79
10
353
22
20
24
33
1.97
1352--1764
80
5.0
81
80
11
480
21
21
23
33
1.97
1784--2476
99
7.0
99
83
5
853
25
22
21
29
1.99
1784--2468
199
3.4
199
90
1
1027
25
22
21
30
1.99
1780--2459
50
13.7
50
69
7
328
26
22
21
30
1.99
2525--3292
44
17.5
45
75
5
658
29
26
16
27
1.97
2608--3291
132
5.2
132
94
0
1176
28
27
16
27
1.97
3874--3974
45
2.2
45
76
10
107
53
8
12
24
1.67
4247--4295
8
6.4
7
80
15
53
4
14
2
79
0.97
6058--6179
62
2.0
62
91
0
199
34
4
20
40
1.74

Tables:   1

The End!