Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_379 ID=scaffold_379-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  7882

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3734--4022
51
5.7
50
78
7
282
25
15
27
31
1.96
3734--4023
101
2.9
101
86
7
367
25
15
27
31
1.96
4046--4189
42
3.7
41
72
21
137
25
15
26
32
1.95
4050--4226
75
2.4
75
87
3
259
23
16
26
32
1.96
5615--5651
2
18.5
2
100
0
74
48
0
0
51
1.00
7734--7767
17
2.0
17
94
0
59
29
0
32
38
1.58

Tables:   1

The End!