Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_382 ID=scaffold_382-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  7659

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36--74
19
2.0
21
85
10
55
69
5
10
15
1.34
237--294
22
2.6
22
84
7
73
43
17
3
36
1.66
250--347
19
4.8
19
85
9
106
38
16
8
36
1.78
284--346
21
3.1
21
90
9
112
38
14
9
38
1.78
632--883
128
2.0
129
81
3
303
28
21
19
29
1.98
776--883
44
2.5
44
84
3
137
29
22
21
26
1.99
1190--1609
44
9.7
43
83
6
485
27
25
18
28
1.98
1190--1609
170
2.4
171
87
3
585
27
25
18
28
1.98
1190--1608
132
3.2
129
86
6
537
27
25
18
28
1.98
1609--2098
88
5.6
88
91
0
739
20
24
28
26
1.99
1686--2001
44
7.2
44
61
4
134
19
24
30
25
1.98
3352--3379
6
4.7
6
100
0
56
0
28
0
71
0.86

Tables:   1

The End!