Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_394 ID=scaffold_394-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  7767

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
563--628
26
2.6
25
83
9
80
57
1
7
33
1.36
2367--2572
89
2.3
89
77
8
204
27
22
19
30
1.98
2626--3196
50
11.4
48
70
7
327
24
21
21
32
1.98
2704--3196
150
3.3
150
78
2
400
24
20
22
32
1.98
2656--3037
200
1.9
200
87
1
559
23
19
23
32
1.97
2656--3081
100
4.3
100
84
0
492
23
20
23
31
1.98
3268--3506
87
2.7
87
88
0
352
25
24
20
29
1.99

Tables:   1

The End!