Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_407 ID=scaffold_407-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  7401

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4746--4826
42
1.9
42
85
5
110
30
13
28
27
1.94
5672--6067
44
9.7
44
77
17
437
24
19
26
29
1.99
5712--6027
34
8.1
35
71
24
208
24
19
26
28
1.99
5672--6066
78
4.9
80
78
16
426
24
20
26
28
1.99
5672--6067
122
3.3
122
91
2
654
24
19
26
29
1.99
6204--6325
44
2.8
44
78
5
122
30
17
22
30
1.96
6876--6969
19
4.8
19
92
5
161
38
11
15
34
1.84
6876--6969
40
2.4
38
94
3
161
38
11
15
34
1.84
6876--6992
19
5.7
22
88
8
96
37
10
16
35
1.82
7196--7240
23
2.0
23
81
0
54
22
0
15
62
1.33

Tables:   1

The End!