Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_412 ID=scaffold_412-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  8343

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1404--1463
21
3.0
21
72
25
58
38
16
8
36
1.79
1411--1465
21
2.8
19
84
12
76
38
16
9
36
1.80
1893--2346
44
10.6
44
70
16
190
28
22
20
29
1.98
2388--2561
50
3.5
50
71
0
159
25
24
20
29
1.99
2361--2549
100
1.9
100
91
0
306
26
22
20
29
1.99
2583--2724
45
3.2
45
84
2
214
26
21
22
29
1.99
2761--2899
44
3.2
44
64
8
111
23
26
25
24
2.00
2724--2956
88
2.7
87
90
4
371
19
24
27
28
1.99

Tables:   1

The End!