Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_418 ID=scaffold_418-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  7484

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3137--3171
10
3.6
10
96
3
63
91
0
0
8
0.42
3137--3181
9
5.0
9
86
10
65
86
2
0
11
0.65
3198--3240
6
7.0
6
80
15
52
79
2
18
0
0.85
3189--3239
25
2.1
25
88
3
77
80
1
15
1
0.89
3575--3619
14
3.2
14
81
9
56
66
0
20
13
1.24
4857--4993
44
3.2
42
68
16
118
27
24
23
25
2.00
4846--5617
175
4.4
176
89
2
1035
28
23
23
25
2.00
4846--5650
88
9.2
88
88
2
993
28
23
23
24
2.00
5742--5999
98
2.6
99
85
3
358
31
23
22
22
1.98
5747--5999
50
5.1
50
75
4
244
30
23
22
22
1.99
5966--6070
50
2.1
50
83
3
131
30
22
17
29
1.96
5738--6070
100
3.3
98
79
6
278
32
23
20
23
1.98
5984--6307
124
2.6
123
92
2
513
34
20
19
25
1.96
6438--6598
44
3.7
44
81
5
148
26
18
26
27
1.98

Tables:   1

The End!