Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_437 ID=scaffold_437-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  7104

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--289
108
2.7
108
90
2
454
30
15
19
34
1.93
3832--3899
8
8.4
8
84
12
86
77
10
0
11
0.98
3832--3894
17
3.7
18
78
17
73
79
9
0
11
0.94
3830--3899
25
2.8
25
81
12
90
78
10
0
11
0.96
4794--4823
13
2.3
13
88
0
51
70
0
16
13
1.18
4786--4826
7
6.0
7
85
5
57
70
0
14
14
1.16
6319--6368
25
2.0
25
84
0
64
36
20
18
26
1.95
6444--6493
25
2.0
25
88
0
73
38
20
16
26
1.92
6219--6581
125
2.9
125
97
0
665
35
19
19
26
1.95
6903--7023
46
2.8
43
76
9
113
28
19
21
29
1.98

Tables:   1

The End!