Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: scaffold_475 ID=scaffold_475-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 7283
ACGTcount: A:0.25, C:0.20, G:0.17, T:0.30
Warning! 647 characters in sequence are not A, C, G, or T
Found at i:1366 original size:132 final size:132
Alignment explanation
Indices: 1128--1429 Score: 453
Period size: 132 Copynumber: 2.3 Consensus size: 132
1118 CATCAGTCTA
* * * * *
1128 CTCCACTACTGCTTAGGGAGATAAGATCTGCTATTCTTCGATCGATTCCACTGTCGACCAAGGAG
1 CTCCACTACTGCTTAGGGAGATAAGATCTG-AAATCTTCAATCGATTCCACTGCCAACCAAGGAG
* *
1193 ATAGAATTACTGGTTTCAATGTACTCCACTGTAACCCCAGGGAGGTAAAA-TCTGCCATCTTCGA
65 ATAGAATTACTAGCTTCAATGTACTCCACTGTAACCCCAGGGAGGTAAAATTC-GCCATCTTCGA
1257 TCTG
129 TCTG
* * * * *
1261 CTCCACTAATGCTTAGGGAAATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACCAGGGGGA
1 CTCCACTACTGCTTAGGGAGATAAGATCTGAAATCTTCAATCGATTCCACTGCCAACCAAGGAGA
1326 TAGAATTACTAGCTTCAATGTACTCCACTGTAACCCCAGGGAGGTAAAATTCGCCATCTTCGATC
66 TAGAATTACTAGCTTCAATGTACTCCACTGTAACCCCAGGGAGGTAAAATTCGCCATCTTCGATC
1391 TG
131 TG
* *
1393 CTCCACTACCGCTTAAGGAGATAAGATCTGAAATCTT
1 CTCCACTACTGCTTAGGGAGATAAGATCTGAAATCTT
1430 NNNNNNNNNN
Statistics
Matches: 152, Mismatches: 16, Indels: 3
0.89 0.09 0.02
Matches are distributed among these distances:
132 122 0.80
133 30 0.20
ACGTcount: A:0.29, C:0.25, G:0.19, T:0.27
Consensus pattern (132 bp):
CTCCACTACTGCTTAGGGAGATAAGATCTGAAATCTTCAATCGATTCCACTGCCAACCAAGGAGA
TAGAATTACTAGCTTCAATGTACTCCACTGTAACCCCAGGGAGGTAAAATTCGCCATCTTCGATC
TG
Found at i:1758 original size:87 final size:87
Alignment explanation
Indices: 1667--2207 Score: 258
Period size: 87 Copynumber: 6.2 Consensus size: 87
1657 GCTAATTCCT
* * *
1667 AGGGAGATACGATTTGAAATTTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTT
1 AGGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTT
1732 CAATGTACTCCACTGTAACCAC
66 CAATGTACTCCACTGTAACCAC
* ** * ** * *
1754 AGGGAGATAAAATCTGCCATCTTCGATCTGCTCCACT---AATGCCTAGGGAGGTAAAATT-CGC
1 AGGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAA--CC-AGGGAGATAGAATTACG-
* * * * *
1815 CATCTTCGATCTGCTCCAC--T-ACCGC
62 --GCTTCAATGTACTCCACTGTAACCAC
* *
1840 TTAAGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACCAAGGAGATAGAATTACTGG
1 --AGGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTAC-GG
*
1905 CTTCAATGTACTCCACTGTAACCTC
63 CTTCAATGTACTCCACTGTAACCAC
* * ** ** * *
1930 AGGGAGGTAAAATCTGTCATCTTTGATCTACTCTACT---AATGCCTAGGGAGATA-AGATCTGA
1 AGGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAA--CC-AGGGAGATAGA-AT-T-A
*** * * *
1991 AATCTTCAATCTATTCCACTGCCAA-C-C
60 CGGCTTCAATGTACTCCACTG-TAACCAC
*** * * * * * *
2018 AGGGAGAT-AGAAT-T-ACGGCTTCAATGTACTCCACTG-TAACCACAGGGAGGTAAAATCTGCC
1 AGGGAGATAAG-ATCTGAAATCTTCAATCTATTCCACTGCCAA-C-CAGGGAGATAGAAT-T-AC
** * * * * *
2079 ATCCTCGATCTGCTCCAC--TAATGCC-T
61 GGCTTCAATGTACTCCACTGTAA--CCAC
*
2105 AGGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTATGGCTT
1 AGGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTT
*
2170 CAATGTACTCCACTGTAACCAT
66 CAATGTACTCCACTGTAACCAC
* *
2192 AGGGAGGTAAAATCTG
1 AGGGAGATAAGATCTG
2208 CCATCTTCGA
Statistics
Matches: 332, Mismatches: 84, Indels: 76
0.67 0.17 0.15
Matches are distributed among these distances:
84 4 0.01
85 2 0.01
86 36 0.11
87 114 0.34
88 111 0.33
89 53 0.16
90 10 0.03
91 2 0.01
ACGTcount: A:0.31, C:0.24, G:0.19, T:0.26
Consensus pattern (87 bp):
AGGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTT
CAATGTACTCCACTGTAACCAC
Found at i:1799 original size:131 final size:131
Alignment explanation
Indices: 1563--1803 Score: 437
Period size: 131 Copynumber: 1.8 Consensus size: 131
1553 NNNNNNNNNN
1563 CTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGGA
1 CTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGGA
* * * *
1628 GGTAAAGTCTGCCATCTTCGATATGCTCCGCTAATTCCTAGGGAGATACGATTTGAAATTTTCAA
66 GATAAAATCTGCCATCTTCGATATGCTCCACTAATGCCTAGGGAGATACGATTTGAAATTTTCAA
1693 T
131 T
1694 CTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGGA
1 CTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGGA
*
1759 GATAAAATCTGCCATCTTCGATCTGCTCCACTAATGCCTAGGGAG
66 GATAAAATCTGCCATCTTCGATATGCTCCACTAATGCCTAGGGAG
1804 GTAAAATTCG
Statistics
Matches: 105, Mismatches: 5, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
131 105 1.00
ACGTcount: A:0.29, C:0.25, G:0.20, T:0.26
Consensus pattern (131 bp):
CTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGGA
GATAAAATCTGCCATCTTCGATATGCTCCACTAATGCCTAGGGAGATACGATTTGAAATTTTCAA
T
Found at i:1833 original size:131 final size:131
Alignment explanation
Indices: 1567--1834 Score: 401
Period size: 131 Copynumber: 2.0 Consensus size: 131
1557 NNNNNNCTAT
*
1567 TCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGGAGGTA
1 TCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGGAGATA
* * * ** * *
1632 AAGTCTGCCATCTTCGATATGCTCCGCTAATTCCTAGGGAGATACGATTTGAAATTTTCAATCTA
66 AAATCTGCCATCTTCGATATGCTCCACTAATGCCTAGGGAGATAAAATTCGAAATCTTCAATCTA
*
1697 T
131 C
1698 TCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGGAGATA
1 TCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGGAGATA
* * ** * *
1763 AAATCTGCCATCTTCGATCTGCTCCACTAATGCCTAGGGAGGTAAAATTCGCCATCTTCGATCTG
66 AAATCTGCCATCTTCGATATGCTCCACTAATGCCTAGGGAGATAAAATTCGAAATCTTCAATCTA
1828 C
131 C
1829 TCCACT
1 TCCACT
1835 ACCGCTTAAG
Statistics
Matches: 122, Mismatches: 15, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
131 122 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (131 bp):
TCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGGAGATA
AAATCTGCCATCTTCGATATGCTCCACTAATGCCTAGGGAGATAAAATTCGAAATCTTCAATCTA
C
Found at i:1890 original size:44 final size:43
Alignment explanation
Indices: 1667--2288 Score: 217
Period size: 44 Copynumber: 14.2 Consensus size: 43
1657 GCTAATTCCT
* * * *
1667 AGGGAGATACGATTTGAAATTTTCAATCTATTCCACTGCCAACC
1 AGGGAGATAAGATCTGAAATCTTCAATCTACTCCACTG-CAACC
*** * *
1711 AGGGAGAT-AGAAT-T-ACGGCTTCAATGTACTCCACTGTAACCAC
1 AGGGAGATAAG-ATCTGAAATCTTCAATCTACTCCACTGCAA-C-C
* ** * *
1754 AGGGAGATAAAATCTGCCATCTTCGATCTGCTCCACT--AATGCC
1 AGGGAGATAAGATCTGAAATCTTCAATCTACTCCACTGCAA--CC
* * ** * * * ** *
1797 TAGGGAGGTAAAAT-TCGCCATCTTCGATCTGCTCCACTACCGCTT
1 -AGGGAGATAAGATCT-GAAATCTTCAATCTACTCCACTGCAAC-C
* *
1842 AAGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACC
1 AGGGAGATAAGATCTGAAATCTTCAATCTACTCCACTG-CAACC
* * * *
1886 AAGGAGAT-AGAATTACTG---GCTTCAATGTACTCCACTGTAACCTC
1 AGGGAGATAAG-A-T-CTGAAATCTTCAATCTACTCCACTGCAA-C-C
* * ** ** *
1930 AGGGAGGTAAAATCTGTCATCTTTGATCTACTCTACT--AATGCC
1 AGGGAGATAAGATCTGAAATCTTCAATCTACTCCACTGCAA--CC
*
1973 TAGGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACC
1 -AGGGAGATAAGATCTGAAATCTTCAATCTACTCCACTG-CAACC
*** * *
2018 AGGGAGAT-AGAAT-T-ACGGCTTCAATGTACTCCACTGTAACCAC
1 AGGGAGATAAG-ATCTGAAATCTTCAATCTACTCCACTGCAA-C-C
* * ** * * *
2061 AGGGAGGTAAAATCTGCCATCCTCGATCTGCTCCACT--AATGCC
1 AGGGAGATAAGATCTGAAATCTTCAATCTACTCCACTGCAA--CC
*
2104 TAGGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACC
1 -AGGGAGATAAGATCTGAAATCTTCAATCTACTCCACTG-CAACC
*** * *
2149 AGGGAGAT-AGAAT-T-ATGGCTTCAATGTACTCCACTGTAACC
1 AGGGAGATAAG-ATCTGAAATCTTCAATCTACTCCACTGCAACC
* * ** * * *
2190 ATAGGGAGGTAAAATCTGCCATCTTCGATTTGCTCCACT--AATGCC
1 --AGGGAGATAAGATCTGAAATCTTCAATCTACTCCACTGCAA--CC
*
2235 TAGGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACC
1 -AGGGAGATAAGATCTGAAATCTTCAATCTACTCCACTG-CAACC
2280 AGGGAGATA
1 AGGGAGATA
2289 GAATTAGTAT
Statistics
Matches: 428, Mismatches: 100, Indels: 100
0.68 0.16 0.16
Matches are distributed among these distances:
41 8 0.02
42 57 0.13
43 70 0.16
44 215 0.50
45 69 0.16
46 3 0.01
47 6 0.01
ACGTcount: A:0.31, C:0.24, G:0.19, T:0.27
Consensus pattern (43 bp):
AGGGAGATAAGATCTGAAATCTTCAATCTACTCCACTGCAACC
Found at i:1919 original size:131 final size:131
Alignment explanation
Indices: 1797--2294 Score: 815
Period size: 131 Copynumber: 3.8 Consensus size: 131
1787 CACTAATGCC
** * *
1797 TAGGGAGGTAAAAT-TCGCCATCTTCGATCTGCTCCACTACCGCTTAAGGAGATAAGATCTGAAA
1 TAGGGAGGTAAAATCT-GCCATCTTCGATCTGCTCCACTAATGCCTAGGGAGATAAGATCTGAAA
*
1861 TCTTCAATCTATTCCACTGCCAACCAAGGAGATAGAATTACTGGCTTCAATGTACTCCACTGTAA
65 TCTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTACTGGCTTCAATGTACTCCAC-GTAA
1926 CC-
129 CCA
* * * *
1928 TCAGGGAGGTAAAATCTGTCATCTTTGATCTACTCTACTAATGCCTAGGGAGATAAGATCTGAAA
1 T-AGGGAGGTAAAATCTGCCATCTTCGATCTGCTCCACTAATGCCTAGGGAGATAAGATCTGAAA
1993 TCTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTAC-GGCTTCAATGTACTCCACTGTAA
65 TCTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTACTGGCTTCAATGTACTCCAC-GTAA
2057 CCA
129 CCA
* *
2060 CAGGGAGGTAAAATCTGCCATCCTCGATCTGCTCCACTAATGCCTAGGGAGATAAGATCTGAAAT
1 TAGGGAGGTAAAATCTGCCATCTTCGATCTGCTCCACTAATGCCTAGGGAGATAAGATCTGAAAT
2125 CTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTA-TGGCTTCAATGTACTCCACTGTAAC
66 CTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTACTGGCTTCAATGTACTCCAC-GTAAC
2189 CA
130 CA
*
2191 TAGGGAGGTAAAATCTGCCATCTTCGATTTGCTCCACTAATGCCTAGGGAGATAAGATCTGAAAT
1 TAGGGAGGTAAAATCTGCCATCTTCGATCTGCTCCACTAATGCCTAGGGAGATAAGATCTGAAAT
2256 CTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTA
66 CTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTA
2295 GTATCTTCGA
Statistics
Matches: 345, Mismatches: 18, Indels: 8
0.93 0.05 0.02
Matches are distributed among these distances:
131 251 0.73
132 93 0.27
133 1 0.00
ACGTcount: A:0.31, C:0.24, G:0.19, T:0.27
Consensus pattern (131 bp):
TAGGGAGGTAAAATCTGCCATCTTCGATCTGCTCCACTAATGCCTAGGGAGATAAGATCTGAAAT
CTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTACTGGCTTCAATGTACTCCACGTAACC
A
Found at i:2026 original size:176 final size:175
Alignment explanation
Indices: 1667--2026 Score: 490
Period size: 176 Copynumber: 2.1 Consensus size: 175
1657 GCTAATTCCT
* * * *
1667 AGGGAGATACGATTTGAAATTTTCAATCTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTT
1 AGGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACCAAGGAGATAGAATTACGGCTT
*
1732 CAATGTACTCCACTGTAACCACAGGGAGATAAAATCTGCCATCTTCGATCTGCTCCACTAATGCC
66 CAATGTACTCCACTGTAACCACAGGGAGATAAAATCTGCCATCTTCGATCTACTCCACTAATGCC
* ** * * * *
1797 TAGGGAGGTAAAATTCGCCATCTTCGATCTGCTCCACTACCGCTT
131 TAGGGAGATAAAATTCGAAATCTTCAATCTACTCCACTACCACTC
*
1842 AAGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACCAAGGAGATAGAATTACTGGCT
1 AGGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACCAAGGAGATAGAATTAC-GGCT
* * * * *
1907 TCAATGTACTCCACTGTAACCTCAGGGAGGTAAAATCTGTCATCTTTGATCTACTCTACTAATGC
65 TCAATGTACTCCACTGTAACCACAGGGAGATAAAATCTGCCATCTTCGATCTACTCCACTAATGC
* * *
1972 CTAGGGAGATAAGA-TCTGAAATCTTCAATCTATTCCACTGCCAAC-C
130 CTAGGGAGATAAAATTC-GAAATCTTCAATCTACTCCACTACC-ACTC
2018 AGGGAGATA
1 AGGGAGATA
2027 GAATTACGGC
Statistics
Matches: 160, Mismatches: 22, Indels: 5
0.86 0.12 0.03
Matches are distributed among these distances:
175 57 0.36
176 102 0.64
177 1 0.01
ACGTcount: A:0.31, C:0.24, G:0.18, T:0.27
Consensus pattern (175 bp):
AGGGAGATAAGATCTGAAATCTTCAATCTATTCCACTGCCAACCAAGGAGATAGAATTACGGCTT
CAATGTACTCCACTGTAACCACAGGGAGATAAAATCTGCCATCTTCGATCTACTCCACTAATGCC
TAGGGAGATAAAATTCGAAATCTTCAATCTACTCCACTACCACTC
Found at i:2157 original size:307 final size:306
Alignment explanation
Indices: 1563--2141 Score: 917
Period size: 307 Copynumber: 1.9 Consensus size: 306
1553 NNNNNNNNNN
*
1563 CTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGGA
1 CTATTCCACTGCCAACCAAGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGGA
* * * * * * *
1628 GGTAAAGTCTGCCATCTTCGATATGCTCCGCTAATTCCTAGGGAGATACGATTTGAAATTTTCAA
66 GGTAAAATCTGCCATCTTCGATATACTCCACTAATGCCTAGGGAGATAAGATCTGAAATCTTCAA
1693 TCTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGG
131 TCTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGG
* * ** *
1758 AGATAAAATCTGCCATCTTCGATCTGCTCCACTAATGCCTAGGGAGGTAAAATTCGCCATCTTCG
196 AGATAAAATCTGCCATCCTCGATCTGCTCCACTAATGCCTAGGGAGATAAAATTCGAAATCTTCA
* * *
1823 ATCTGCTCCACTACCGCTTAAGGAGATAAGATCTGAAATCTTCAAT
261 ATCTACTCCACTACCACTCAAGGAGATAAGATCTGAAATCTTCAAT
*
1869 CTATTCCACTGCCAACCAAGGAGATAGAATTACTGGCTTCAATGTACTCCACTGTAACCTCAGGG
1 CTATTCCACTGCCAACCAAGGAGATAGAATTAC-GGCTTCAATGTACTCCACTGTAACCACAGGG
* * * *
1934 AGGTAAAATCTGTCATCTTTGATCTACTCTACTAATGCCTAGGGAGATAAGATCTGAAATCTTCA
65 AGGTAAAATCTGCCATCTTCGATATACTCCACTAATGCCTAGGGAGATAAGATCTGAAATCTTCA
1999 ATCTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGG
130 ATCTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGG
* *
2064 GAGGTAAAATCTGCCATCCTCGATCTGCTCCACTAATGCCTAGGGAGATAAGA-TCTGAAATCTT
195 GAGATAAAATCTGCCATCCTCGATCTGCTCCACTAATGCCTAGGGAGATAAAATTC-GAAATCTT
*
2128 CAATCTATTCCACT
259 CAATCTACTCCACT
2142 GCCAACCAGG
Statistics
Matches: 249, Mismatches: 22, Indels: 3
0.91 0.08 0.01
Matches are distributed among these distances:
306 34 0.14
307 215 0.86
ACGTcount: A:0.30, C:0.25, G:0.18, T:0.27
Consensus pattern (306 bp):
CTATTCCACTGCCAACCAAGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGGA
GGTAAAATCTGCCATCTTCGATATACTCCACTAATGCCTAGGGAGATAAGATCTGAAATCTTCAA
TCTATTCCACTGCCAACCAGGGAGATAGAATTACGGCTTCAATGTACTCCACTGTAACCACAGGG
AGATAAAATCTGCCATCCTCGATCTGCTCCACTAATGCCTAGGGAGATAAAATTCGAAATCTTCA
ATCTACTCCACTACCACTCAAGGAGATAAGATCTGAAATCTTCAAT
Found at i:4148 original size:6 final size:6
Alignment explanation
Indices: 4137--4172 Score: 56
Period size: 6 Copynumber: 6.2 Consensus size: 6
4127 CCCAGCGGGG
*
4137 TTCTTT TTCTTT TTTTTT TTCTTT TT-TTT TTCTTT T
1 TTCTTT TTCTTT TTCTTT TTCTTT TTCTTT TTCTTT T
4173 CCCCTTTTTT
Statistics
Matches: 27, Mismatches: 2, Indels: 2
0.87 0.06 0.06
Matches are distributed among these distances:
5 5 0.19
6 22 0.81
ACGTcount: A:0.00, C:0.11, G:0.00, T:0.89
Consensus pattern (6 bp):
TTCTTT
Found at i:4194 original size:11 final size:11
Alignment explanation
Indices: 4140--4172 Score: 57
Period size: 11 Copynumber: 2.9 Consensus size: 11
4130 AGCGGGGTTC
4140 TTTTTCTTTTTT
1 TTTTTC-TTTTT
4152 TTTTTCTTTTT
1 TTTTTCTTTTT
4163 TTTTTCTTTT
1 TTTTTCTTTT
4173 CCCCTTTTTT
Statistics
Matches: 21, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
11 15 0.71
12 6 0.29
ACGTcount: A:0.00, C:0.09, G:0.00, T:0.91
Consensus pattern (11 bp):
TTTTTCTTTTT
Done.