Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_481 ID=scaffold_481-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  6549

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2577--2615
21
1.9
19
90
10
60
84
0
10
5
0.76
3558--4574
44
22.6
44
73
10
551
31
17
21
29
1.96
3465--3995
181
2.9
181
86
1
715
30
18
21
29
1.97
3933--4051
21
5.5
21
62
7
67
27
14
27
30
1.95
3697--4305
272
2.3
270
82
4
739
29
17
22
30
1.97
4012--4453
181
2.4
181
88
2
654
32
17
20
29
1.96
6154--6188
18
1.9
18
88
0
52
20
5
5
68
1.31
6200--6253
3
16.7
3
78
14
54
35
3
0
61
1.14
6205--6253
11
4.7
10
80
16
55
34
4
0
61
1.15

Tables:   1

The End!