Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_485 ID=scaffold_485-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  6611

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
507--1035
46
11.5
46
89
0
743
30
28
16
25
1.96
1779--1941
49
3.1
49
65
19
112
47
7
14
30
1.72
1749--2067
108
3.1
104
80
11
375
48
7
15
28
1.72
1851--2043
97
2.0
97
90
0
305
48
8
15
28
1.73
2331--2420
6
14.8
6
74
18
71
3
15
1
80
0.91
2332--2401
19
3.7
19
84
7
81
4
15
1
78
0.98
3799--3851
26
2.0
26
92
0
88
26
18
20
33
1.96

Tables:   1

The End!