Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_490 ID=scaffold_490-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  6759

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97--438
17
19.3
17
68
18
155
31
13
11
42
1.81
93--438
35
9.7
35
72
13
199
31
13
11
42
1.81
407--473
16
4.1
17
68
12
59
44
8
8
37
1.67
407--442
18
2.1
17
89
5
54
47
8
8
36
1.64
6112--6186
1
75.0
1
72
0
60
86
8
4
1
0.74
6112--6186
12
6.4
11
78
14
69
86
8
4
1
0.74
6115--6186
19
3.9
19
80
15
80
86
8
4
1
0.76
6136--6186
26
2.0
26
88
7
77
88
7
3
0
0.63
6113--6176
8
7.9
8
83
10
69
85
9
3
1
0.76

Tables:   1

The End!