Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_565 ID=scaffold_565-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  5964

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
747--775
14
2.1
14
100
0
58
27
13
44
13
1.82
1484--1953
132
3.6
132
90
2
728
29
25
18
26
1.98
1631--1947
44
7.2
44
65
17
140
30
24
19
25
1.98
3226--3282
23
2.5
24
81
16
68
10
14
0
75
1.05
3742--3779
6
6.2
6
93
6
67
0
15
0
84
0.63
3784--3826
16
2.7
15
85
10
50
2
11
2
83
0.83
3751--3826
35
2.1
36
83
7
93
1
17
1
80
0.85
3742--3828
19
4.8
18
75
14
72
1
17
1
80
0.84

Tables:   1

The End!