Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_571 ID=scaffold_571-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  5605

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1001--1049
10
4.9
10
78
9
55
28
16
30
24
1.96
993--1049
20
2.9
19
87
7
87
29
17
29
22
1.97
3915--4014
12
8.8
12
75
13
86
8
19
1
72
1.15
3918--4004
45
1.9
45
90
0
138
8
20
0
71
1.11
3912--3991
6
14.0
6
77
7
69
5
21
0
73
1.01
3916--4016
45
2.2
43
83
11
130
7
19
0
71
1.17

Tables:   1

The End!