Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_61 ID=scaffold_61-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  19479

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2916--2944
14
2.1
14
100
0
58
68
0
0
31
0.89
5559--5607
26
1.9
25
84
12
64
18
10
0
71
1.13
7990--8024
16
2.2
16
100
0
70
28
22
25
22
1.99
10316--10341
13
2.0
13
100
0
52
30
7
15
46
1.74
12282--12322
20
2.0
20
90
9
66
14
14
4
65
1.42
13268--13309
7
6.0
7
81
18
52
69
0
16
14
1.20
13268--13309
21
2.0
21
86
9
59
69
0
16
14
1.20
14098--14254
82
1.9
82
98
0
305
27
14
22
35
1.93
14648--15384
44
16.6
43
79
5
603
31
17
23
27
1.97
14614--15340
89
8.2
89
87
1
735
31
18
23
27
1.97
16355--16403
26
1.9
25
84
12
64
18
10
0
71
1.13
17144--17198
22
2.3
24
84
9
69
32
7
3
56
1.44

Tables:   1

The End!