Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_653 ID=scaffold_653-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  10988

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
120--304
44
4.2
44
68
5
158
23
24
21
30
1.99
1--1345
132
10.2
132
89
1
2011
25
23
19
30
1.98
1978--3724
132
13.2
132
90
0
2706
25
23
20
30
1.99
3022--3204
44
4.2
44
62
10
104
26
22
20
30
1.98
9161--10633
132
11.2
132
88
2
2136
26
23
19
30
1.98
10546--10719
86
2.0
86
88
0
258
29
22
16
31
1.96
10414--10851
218
2.0
218
89
0
662
28
23
18
30
1.97
10287--10982
350
2.0
350
91
0
1133
27
23
18
30
1.98
10632--10988
132
2.7
131
89
0
507
26
23
19
30
1.98

Tables:   1

The End!