Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_660 ID=scaffold_660-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  4831

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--251
87
2.9
87
87
1
324
27
26
19
26
1.99
2352--2395
6
7.0
6
90
10
70
0
18
0
81
0.68
2352--2395
13
3.5
12
90
9
70
0
18
0
81
0.68
2420--2464
9
5.2
8
80
15
54
13
0
4
82
0.82
2412--2466
19
2.9
18
83
5
74
12
0
5
81
0.84
3217--3280
24
2.5
25
80
12
69
60
7
12
18
1.55
4502--4544
19
2.3
17
78
21
50
41
13
23
20
1.88

Tables:   1

The End!