Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_669 ID=scaffold_669-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  4762

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139--236
27
3.6
26
76
14
65
58
6
3
32
1.38
189--252
23
2.7
23
79
13
60
57
4
1
35
1.29
139--242
25
4.1
24
76
15
79
58
5
2
32
1.36
323--397
33
2.2
32
75
13
80
58
1
12
28
1.42
546--587
3
14.0
3
89
0
66
64
2
2
30
1.19
876--944
22
3.2
21
76
17
61
37
15
8
37
1.79
879--923
22
2.0
22
86
4
63
37
15
8
37
1.79
902--949
21
2.4
20
93
6
80
37
14
10
37
1.81
936--961
12
2.2
12
100
0
52
42
15
7
34
1.75
1742--1951
44
4.8
44
82
3
262
29
27
17
25
1.97
2120--2713
44
13.5
44
76
6
506
30
26
15
27
1.96
2112--2713
132
4.6
132
87
5
639
30
26
15
27
1.96

Tables:   1

The End!