Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_75 ID=scaffold_75-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  19203

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3657--3720
10
6.5
10
81
15
64
81
10
7
0
0.88
3665--3717
22
2.4
23
87
6
74
81
11
7
0
0.88
3665--3727
22
2.8
22
80
7
65
82
9
6
1
0.90
3666--3728
8
7.9
8
78
10
58
82
9
6
1
0.90
4155--4202
18
2.7
18
87
3
62
79
4
14
2
0.98
5199--5519
88
3.7
87
86
1
401
28
23
22
24
1.99
5472--6255
134
5.8
134
96
0
1370
26
21
23
28
1.99
6246--7099
82
10.3
82
94
1
1237
33
24
20
21
1.97
16593--16788
108
1.8
108
85
4
279
25
18
11
45
1.82
17311--18183
46
19.4
46
63
17
231
27
19
23
29
1.98
17213--18261
134
7.8
134
94
1
1769
27
20
23
29
1.99
18288--18507
81
2.7
82
94
1
388
30
27
19
21
1.98
18288--18507
40
5.4
42
78
10
242
30
27
19
21
1.98

Tables:   1

The End!