Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_742 ID=scaffold_742-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  4228

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--647
88
7.5
88
83
7
853
25
25
22
26
2.00
1--393
44
8.9
44
64
17
163
24
24
22
27
2.00
1--647
176
3.8
176
88
6
1009
25
25
22
26
2.00
322--469
74
2.0
74
91
0
242
27
24
24
24
2.00
427--647
44
5.0
45
66
16
147
24
25
23
27
2.00
234--558
162
2.0
162
95
0
578
25
24
24
25
2.00
145--642
250
2.0
252
93
0
856
25
25
23
25
2.00
1861--1893
9
3.6
9
95
4
57
9
12
0
78
0.95
2472--2510
20
2.1
19
85
9
53
10
2
10
76
1.10
2487--2519
9
3.8
9
88
8
50
12
0
6
81
0.85
2479--2523
20
2.3
19
85
14
56
13
0
8
77
0.98

Tables:   1

The End!