Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_77 ID=scaffold_77-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  16884

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
160--212
17
3.2
17
81
10
65
49
3
0
47
1.19
13712--13821
24
4.6
24
94
1
186
34
10
24
30
1.88
14255--14298
21
2.1
21
91
0
70
40
6
31
20
1.79
14204--14345
72
2.0
72
81
0
167
30
14
27
27
1.95
14276--14421
51
2.9
51
78
0
157
30
18
23
27
1.98
14434--14532
51
1.9
51
89
0
153
36
17
19
27
1.94
14185--14953
261
3.0
260
85
1
1022
30
17
23
28
1.97
15568--15611
19
2.3
19
88
0
61
56
13
20
9
1.64
16439--16495
3
19.0
3
100
0
114
33
0
0
66
0.92
16494--16543
3
16.7
3
100
0
100
34
32
0
34
1.58

Tables:   1

The End!