Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_78 ID=scaffold_78-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  16405

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5150--5318
91
1.9
90
84
1
230
28
20
14
36
1.92
8436--8605
45
3.8
45
84
0
214
20
20
19
40
1.92
13552--13594
20
2.2
20
91
0
68
46
4
0
48
1.22
13556--13595
12
3.7
12
75
25
52
47
5
0
47
1.24
13557--13595
20
2.0
20
100
0
78
46
5
0
48
1.24
13718--13820
47
2.1
49
83
3
129
55
3
2
37
1.33

Tables:   1

The End!