Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_80 ID=scaffold_80-JGI_221_v2.0
Parameters: 2 7 7 80 10 50 1000
Length:  35213

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
390--678
142
2.0
142
100
0
578
27
21
9
41
1.84
1006--1044
12
3.2
12
85
0
51
20
23
5
51
1.67
2384--2422
12
3.2
12
85
0
51
20
23
5
51
1.67
2969--3019
12
4.2
12
80
5
59
17
23
5
52
1.66
5133--5171
12
3.2
12
85
0
51
20
23
5
51
1.67
6699--6737
12
3.2
12
85
0
51
20
23
5
51
1.67
7568--7606
12
3.2
12
85
0
51
20
23
5
51
1.67
17587--17625
12
3.2
12
85
0
51
20
23
5
51
1.67
30094--30132
4
9.8
4
82
0
51
23
23
2
51
1.61
30093--30131
20
2.0
20
94
0
69
20
23
2
53
1.57
31607--31635
11
2.6
11
100
0
58
41
17
10
31
1.83
32094--32132
12
3.2
12
85
0
51
20
23
5
51
1.67
33364--33402
4
9.8
4
82
0
51
23
23
2
51
1.61
33363--33401
20
2.0
20
94
0
69
20
23
2
53
1.57
33602--33843
50
4.7
50
79
7
204
24
27
20
27
1.99

Tables:   1

The End!