Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398267.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_157.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31655

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
182--507
170
2.0
161
84
5
347
38
11
11
34
1.79
1201--1743
170
3.2
169
71
4
455
36
12
13
34
1.82
2999--3309
171
1.9
161
84
5
333
34
10
14
37
1.81
5101--6118
171
6.0
171
72
6
702
35
13
11
36
1.80
10645--10954
168
1.9
160
88
4
385
38
10
12
34
1.79
12098--12412
170
1.9
155
80
12
357
39
10
12
33
1.77
13141--13174
16
2.1
17
88
5
52
29
0
5
64
1.17
14361--14771
171
2.4
171
78
1
430
33
11
11
38
1.77
15376--15766
171
2.3
170
84
1
487
35
13
10
38
1.78
20066--20436
171
2.2
171
83
4
471
36
11
12
39
1.80
22392--23582
171
7.0
171
73
3
835
34
12
10
37
1.77
22879--23545
340
2.0
326
79
8
693
35
12
11
36
1.79
26036--26501
171
2.7
170
78
4
454
36
14
10
35
1.82
27315--27742
170
2.5
170
74
2
421
33
14
9
36
1.79

Tables:   1

The End!