Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398269.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1571.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4473

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--495
170
2.9
169
83
4
603
39
11
13
35
1.80
506--947
171
2.6
171
84
4
563
37
13
12
36
1.83
1881--2302
172
2.4
172
84
2
544
40
10
13
35
1.78
2147--2455
153
2.0
153
83
3
381
38
10
12
38
1.77
2300--3691
171
8.1
170
83
3
1519
37
12
14
35
1.83
1881--3693
342
5.3
339
77
9
1611
38
11
14
35
1.82
2300--3693
513
2.7
510
84
5
1691
37
12
14
35
1.83

Tables:   1

The End!