Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018398288.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1591.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 600

Length: 1001
ACGTcount: A:0.27, C:0.10, G:0.09, T:0.32

Warning! 221 characters in sequence are not A, C, G, or T


Found at i:758 original size:10 final size:10

Alignment explanation


    Indices: 743--768  Score: 52
    Period size: 10  Copynumber: 2.6  Consensus size: 10

        733 TGTTAAAACA

                      
        743 GATTGTAATT
          1 GATTGTAATT

                      
        753 GATTGTAATT
          1 GATTGTAATT

                  
        763 GATTGT
          1 GATTGT

        769 CTACCTCGAG


Statistics
Matches: 16,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  10   16  1.00

ACGTcount: A:0.27, C:0.00, G:0.23, T:0.50


Consensus pattern (10 bp):   
GATTGTAATT
Done.