Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398304.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1606.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6835

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3182--3557
171
2.2
174
82
4
456
39
11
14
34
1.81
3263--3597
171
1.9
173
80
7
387
40
12
13
34
1.82
4587--5179
171
3.5
169
79
5
557
35
13
10
39
1.80
6116--6433
172
1.8
172
80
4
381
35
10
11
41
1.76
6116--6479
172
2.1
172
78
5
378
34
12
11
41
1.79

Tables:   1

The End!