Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_018398308.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_161.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 25590
ACGTcount: A:0.20, C:0.07, G:0.07, T:0.20
Warning! 11687 characters in sequence are not A, C, G, or T
Found at i:6186 original size:169 final size:171
Alignment explanation
Indices: 5987--6359 Score: 425
Period size: 170 Copynumber: 2.2 Consensus size: 171
5977 NNNAAGTAGA
* * * **
5987 TTTTTTTACATTTTTCACTAAAATAGACTATAATTGAATGCATGCCTAAAG-AA-ATGGTAGAAA
1 TTTTTTTACATTTTT-GCTAAAATAGACTATAATTAAATGCATACCTAAAGAAACAT-AAAGAAA
* * * * *
6050 ATGCCATTTACTGAG-AAGAAAAGTCCATTCATA-TTCACTCATTCCTTCCAAAGCCTTATTGCT
64 AAGCCATTCACTG-GCAAGAAAAGTCAATTCATAGTT-ACTCATTCCTTCAAAAGCCCTATTGCT
* * * * *
6113 CGCTTTAAATTGTTTTATCATTTCATAATTGATTTTAAGTT-GAC
127 CGCTTTAAATCGTTTTATAATCTCATAATTAATTTTAAGTTAAAC
* * * **
6157 TTTTTTTACATTTTTGCTTAAACAGACTATAATTAAATGTATACCTTGAGAAACATAAAGAAAAA
1 TTTTTTTACATTTTTGCTAAAATAGACTATAATTAAATGCATACCTAAAGAAACATAAAGAAAAA
* * * *
6222 GGCATTCATTGGCAAGAAAAGTCAATTTATAGTTACTCATTCTTTCAAAAGCCCTATTGCTCGCT
66 GCCATTCACTGGCAAGAAAAGTCAATTCATAGTTACTCATTCCTTCAAAAGCCCTATTGCTCGCT
*
6287 TTAAATCGTTTTATAATCTCATAATTAATTTTAAGTTAAAT
131 TTAAATCGTTTTATAATCTCATAATTAATTTTAAGTTAAAC
*
6328 TTTTTTTATATTTTTTG-TAAAATAGACTATAA
1 TTTTTTTACA-TTTTTGCTAAAATAGACTATAA
6360 GTGATTGTCT
Statistics
Matches: 169, Mismatches: 28, Indels: 11
0.81 0.13 0.05
Matches are distributed among these distances:
169 28 0.17
170 108 0.64
171 27 0.16
172 6 0.04
ACGTcount: A:0.35, C:0.14, G:0.11, T:0.40
Consensus pattern (171 bp):
TTTTTTTACATTTTTGCTAAAATAGACTATAATTAAATGCATACCTAAAGAAACATAAAGAAAAA
GCCATTCACTGGCAAGAAAAGTCAATTCATAGTTACTCATTCCTTCAAAAGCCCTATTGCTCGCT
TTAAATCGTTTTATAATCTCATAATTAATTTTAAGTTAAAC
Found at i:6282 original size:170 final size:171
Alignment explanation
Indices: 6065--6403 Score: 450
Period size: 170 Copynumber: 2.0 Consensus size: 171
6055 ATTTACTGAG
* * * *
6065 AAGAAAAGTCCATTCATATTCACTCATTCCTTCCAAAGCCTTATTGCTCGCTTTAAATTGTTTTA
1 AAGAAAAGTCAATTCATATTCACTCATTCCTTCAAAAGCCCTATTGCTCGCTTTAAATCGTTTTA
* * * * * *
6130 TCATTTCATAATTGATTTTAAGTT-GACTTTTTTTACA-TTTTTGCTTAAACAGACTATAATTAA
66 TAATCTCATAATTAATTTTAAGTTAAACTTTTTTTACATTTTTTG-TAAAACAGACTATAAGTAA
*
6193 ATGTATACCTTGAGAAACATAAAGAAAAAGGCATTCATTGGC
130 ATGTATACCTTGAGAAACAGAAAGAAAAAGGCATTCATTGGC
* *
6235 AAGAAAAGTCAATTTATAGTT-ACTCATTCTTTCAAAAGCCCTATTGCTCGCTTTAAATCGTTTT
1 AAGAAAAGTCAATTCATA-TTCACTCATTCCTTCAAAAGCCCTATTGCTCGCTTTAAATCGTTTT
* * * *
6299 ATAATCTCATAATTAATTTTAAGTTAAATTTTTTTTATATTTTTTGTAAAATAGACTATAAGTGA
65 ATAATCTCATAATTAATTTTAAGTTAAACTTTTTTTACATTTTTTGTAAAACAGACTATAAGTAA
* * * *
6364 TTGTCTACCTTGAGAAACGGGAAGAAAAAGGCATTCATTG
130 ATGTATACCTTGAGAAACAGAAAGAAAAAGGCATTCATTG
6404 ANNNNNNNNN
Statistics
Matches: 145, Mismatches: 21, Indels: 5
0.85 0.12 0.03
Matches are distributed among these distances:
170 77 0.53
171 62 0.43
172 6 0.04
ACGTcount: A:0.34, C:0.14, G:0.12, T:0.39
Consensus pattern (171 bp):
AAGAAAAGTCAATTCATATTCACTCATTCCTTCAAAAGCCCTATTGCTCGCTTTAAATCGTTTTA
TAATCTCATAATTAATTTTAAGTTAAACTTTTTTTACATTTTTTGTAAAACAGACTATAAGTAAA
TGTATACCTTGAGAAACAGAAAGAAAAAGGCATTCATTGGC
Found at i:9037 original size:22 final size:20
Alignment explanation
Indices: 9012--9053 Score: 57
Period size: 21 Copynumber: 2.0 Consensus size: 20
9002 TTACGAGATT
9012 ATAAAACCTTTTAAAGCGAGTA
1 ATAAAA-CTTTTAAAG-GAGTA
*
9034 ATAAGACTTTTAAAGGAGTA
1 ATAAAACTTTTAAAGGAGTA
9054 GGTGACCATA
Statistics
Matches: 19, Mismatches: 1, Indels: 2
0.86 0.05 0.09
Matches are distributed among these distances:
20 5 0.26
21 9 0.47
22 5 0.26
ACGTcount: A:0.45, C:0.10, G:0.17, T:0.29
Consensus pattern (20 bp):
ATAAAACTTTTAAAGGAGTA
Found at i:10250 original size:171 final size:169
Alignment explanation
Indices: 9805--10445 Score: 506
Period size: 170 Copynumber: 3.8 Consensus size: 169
9795 NNNNNNNNNN
* * * *
9805 TTCAATTATAGTCTATTTTAACCAAAAATGTAAAAAAATTCAACTTCAAATAAATT-TTGAGATT
1 TTCAATTGTAGTCTATTTTAAACAAAAATGTAAAAAAATTCAACTTAAAATCAATTATT-AGATT
* ** ** * * *
9869 AAAAAATTATTTAAAGTTAGTAGTAAGGCTTTCGATGGAATAGGTGACTAT-AATGGACTTTTCT
65 ATAAAACAATTTAAAGGGA-TAATAA-GCTTTTGAAGGAATAGGTGACTATAAATGGACTTTTCT
*
9933 TGCAAATGAATACATTTTTCTGCACGTTTCTCAAGGTAGACA
128 TGCAAATGAATACATATTTCTGCACGTTTCTCAAGGTAGACA
* * ** *
9975 TTCAATTGTAGTCTATTTT-AACTAAAAACGTAAAAAAATTTAACTTAAAATCAATTACAAGTTT
1 TTCAATTGTAGTCTATTTTAAAC-AAAAATGTAAAAAAATTCAACTTAAAATCAATTATTAGATT
** ********* *
10039 ATAAAACCTTTTAAAGCNNNNNNNNNNGCTTTTGAAGGAATAGGTGACTATAAATGAACTTTTCT
65 ATAAAACAATTTAAAG--GGATAATAAGCTTTTGAAGGAATAGGTGACTATAAATGGACTTTTCT
* * * ** * * *
10104 TGCCAATGAATGCCTATTTCTTTAGGTTTCTCATGGTAGACC
128 TGCAAATGAATACATATTTCTGCACGTTTCTCAAGGTAGACA
** * *
10146 TTTGATTGTAGTCTGTTTTAAACAAAAATGTAAAAAAATCCAACTTAAAATCAATTATTAGATTA
1 TTCAATTGTAGTCTATTTTAAACAAAAATGTAAAAAAATTCAACTTAAAATCAATTATTAGATTA
* *
10211 TAAAACAATTTAAAGGGATCAATAAGCCTTTTAAAGGAATTGGTGACTATAAATGGACTTTTCTT
66 TAAAACAATTTAAAGGGAT-AATAAG-CTTTTGAAGGAATAGGTGACTATAAATGGACTTTTCTT
* * * * * *
10276 -CTCAAT-AAAAGAAAATTTCTAC-CGTTT-TTAGAGGTA-AGCA
129 GC-AAATGAATA-CATATTTCTGCACGTTTCTCA-AGGTAGA-CA
* ** * * ** * * *
10316 TTCAATTATAGTCTATTTTAATGATAAATATAAAAAACCTCTACTTAAAATCAATTATGATATTA
1 TTCAATTGTAGTCTATTTTAAACAAAAATGTAAAAAAATTCAACTTAAAATCAATTATTAGATTA
** * * * *
10381 TATTACAATTTAAAGTGAACAATAAGGCTTTTTAAGGAATCGGTGACTATAAATGGACTTTTCTT
66 TAAAACAATTTAAAG-GGATAATAA-GCTTTTGAAGGAATAGGTGACTATAAATGGACTTTTCTT
10446 CTCAATAAAT
Statistics
Matches: 369, Mismatches: 88, Indels: 28
0.76 0.18 0.06
Matches are distributed among these distances:
169 5 0.01
170 203 0.55
171 158 0.43
172 3 0.01
ACGTcount: A:0.38, C:0.12, G:0.13, T:0.36
Consensus pattern (169 bp):
TTCAATTGTAGTCTATTTTAAACAAAAATGTAAAAAAATTCAACTTAAAATCAATTATTAGATTA
TAAAACAATTTAAAGGGATAATAAGCTTTTGAAGGAATAGGTGACTATAAATGGACTTTTCTTGC
AAATGAATACATATTTCTGCACGTTTCTCAAGGTAGACA
Found at i:12037 original size:170 final size:169
Alignment explanation
Indices: 11655--12343 Score: 576
Period size: 171 Copynumber: 4.0 Consensus size: 169
11645 NNNNNNNNNN
* * * **
11655 ATAATTGATTTT-AAGTTGAATTTTTTTACATTTTTGTTTAAAACAGACTATAATCGAAGGTCTA
1 ATAATTGATTTTGAAATTGAA-TTTTTTACATTTTTGGTTAAAACAGACTATAATTGAATATCTA
* * * * * * **
11719 C-CACTAGAAACCTAAAAAAAAAGGCATTCATTGGCAAGAAAAGTCCATTTATAATCACCTGTTC
65 CTTA--AGAAACGTGAAGAAAAAGGCATTCATTTGCAAGAAAAGTCCATTTATAGTCACCCATTC
* * ** *
11783 TTTCAAAAGCCTTATTTCT-CG-CTTTAAAAGGTTTTATGAA-CTT
128 CTTCAAAAGCCTCA---CTACGACTTTAAATTGTTTTAT-AATCTC
* * * * * * * *
11826 GTAATTGATTTT-AAGTTAAAGTTTTGTATATTTTCGGTTAAAGCAGACTACAATTGAATATCTA
1 ATAATTGATTTTGAAATTGAA-TTTTTTACATTTTTGGTTAAAACAGACTATAATTGAATATCTA
* *
11890 CCTTGAGAAACGTGAAGAAAAATGCATTCATTTGCAAGAAAAGTCCA-TTATAGTCACCCATTCC
65 -CTTAAGAAACGTGAAGAAAAAGGCATTCATTTGCAAGAAAAGTCCATTTATAGTCACCCATTCC
* * *
11954 GTCAAAAGCCTCACTACGAACTTTAAATTATTTTTTAATCTC
129 TTCAAAAGCCTCACTACG-ACTTTAAATTGTTTTATAATCTC
* *****
11996 AAAATTGA-TTTGAAATTGAATTTTTTGACATTTTTGGTTAAAACAGACTATAATTGAANNNNNN
1 ATAATTGATTTTGAAATTGAATTTTTT-ACATTTTTGGTTAAAACAGACTATAATTGAA-TATCT
**** * * *
12060 NNNNAAGAAACGTGAAGAAAAAGGCATTCATTGGCCAA-AAAAGTCTATTTATCGTCACCCATTC
64 ACTTAAGAAACGTGAAGAAAAAGGCATTCATTTG-CAAGAAAAGTCCATTTATAGTCACCCATTC
*
12124 CTTCAAAAGCCTCATTAC-ACGCTTTAAATTGTTTTATAATCTC
128 CTTCAAAAGCCTCACTACGA--CTTTAAATTGTTTTATAATCTC
********** *
12167 ATAATTGATTTTNNNNNNNNNNTTTTTACATTTTTGGTTAAAACATACTATAATTGAATATCTAC
1 ATAATTGATTTTGAAATTGAATTTTTTACATTTTTGGTTAAAACAGACTATAATTGAATATCTAC
* * * *
12232 TTCAAGAAACATGAA-AAAAAGGCATTCATTTTCAAGAAAAGTCCATTTCTAGTCACCCATTTCT
66 TT-AAGAAACGTGAAGAAAAAGGCATTCATTTGCAAGAAAAGTCCATTTATAGTCACCCATTCCT
12296 TCAAAAGCCTTATCACT-CG-CTTTAAATTGTTTTATAATCTC
130 TCAAAAGCC---TCACTACGACTTTAAATTGTTTTATAATCTC
12337 ATAATTG
1 ATAATTG
12344 NNNNNNNNNN
Statistics
Matches: 412, Mismatches: 86, Indels: 41
0.76 0.16 0.08
Matches are distributed among these distances:
167 2 0.00
168 2 0.00
169 14 0.03
170 189 0.46
171 191 0.46
172 10 0.02
173 4 0.01
ACGTcount: A:0.35, C:0.15, G:0.12, T:0.35
Consensus pattern (169 bp):
ATAATTGATTTTGAAATTGAATTTTTTACATTTTTGGTTAAAACAGACTATAATTGAATATCTAC
TTAAGAAACGTGAAGAAAAAGGCATTCATTTGCAAGAAAAGTCCATTTATAGTCACCCATTCCTT
CAAAAGCCTCACTACGACTTTAAATTGTTTTATAATCTC
Found at i:12200 original size:171 final size:170
Alignment explanation
Indices: 11655--12343 Score: 602
Period size: 170 Copynumber: 4.0 Consensus size: 170
11645 NNNNNNNNNN
* * * * * **
11655 ATAATTGATTTTAAGTTGAATTTTTTTACATTTTTGTTTAAAACAGACTATAATCGAAGGTCTAC
1 ATAATTGATTTGAAATTGAATTTTTTGACATTTTTGGTTAAAACAGACTATAATTGAATATCTAC
** * * * * * ** *
11720 CACTAGAAACCTAAAAAAAAAGGCATTCATTGGCAAGAAAAGTCCATTTATAATCACCTGTTCTT
66 TTCAAGAAACGTGAAGAAAAAGGCATTCATT-GCAAGAAAAGTCCATTTATAGTCACCCATTCCT
* * * ** *
11785 TCAAAAGCCTTATTTCTCGCTTTAAAAGGTTTTATGAA-CTT
130 TCAAAAGCCTCATTACACGCTTTAAATTGTTTTAT-AATCTC
* * * ** * * * *
11826 GTAATTGATTTTAAGTT-AAAGTTTTGTATATTTTCGGTTAAAGCAGACTACAATTGAATATCTA
1 ATAATTGATTTGAAATTGAATTTTTTG-ACATTTTTGGTTAAAACAGACTATAATTGAATATCTA
* *
11890 CCTT-GAGAAACGTGAAGAAAAATGCATTCATTTGCAAGAAAAGTCCA-TTATAGTCACCCATTC
65 -CTTCAAGAAACGTGAAGAAAAAGGCATTCA-TTGCAAGAAAAGTCCATTTATAGTCACCCATTC
* * * * *
11953 CGTCAAAAGCCTCACTACGA-ACTTTAAATTATTTTTTAATCTC
128 CTTCAAAAGCCTCATTAC-ACGCTTTAAATTGTTTTATAATCTC
* *******
11996 AAAATTGATTTGAAATTGAATTTTTTGACATTTTTGGTTAAAACAGACTATAATTGAANNNNNNN
1 ATAATTGATTTGAAATTGAATTTTTTGACATTTTTGGTTAAAACAGACTATAATTGAATATCTAC
*** * *
12061 NNNAAGAAACGTGAAGAAAAAGGCATTCATTGGCCAA-AAAAGTCTATTTATCGTCACCCATTCC
66 TTCAAGAAACGTGAAGAAAAAGGCATTCATT-G-CAAGAAAAGTCCATTTATAGTCACCCATTCC
12125 TTCAAAAGCCTCATTACACGCTTTAAATTGTTTTATAATCTC
129 TTCAAAAGCCTCATTACACGCTTTAAATTGTTTTATAATCTC
********** *
12167 ATAATTGATTTTNNNNNNNNNNTTTTT-ACATTTTTGGTTAAAACATACTATAATTGAATATCTA
1 ATAATTGA-TTTGAAATTGAATTTTTTGACATTTTTGGTTAAAACAGACTATAATTGAATATCTA
* * * *
12231 CTTCAAGAAACATGAA-AAAAAGGCATTCATTTTCAAGAAAAGTCCATTTCTAGTCACCCATTTC
65 CTTCAAGAAACGTGAAGAAAAAGGCATTCA-TTGCAAGAAAAGTCCATTTATAGTCACCCATTCC
* * *
12295 TTCAAAAGCCTTATCACTCGCTTTAAATTGTTTTATAATCTC
129 TTCAAAAGCCTCATTACACGCTTTAAATTGTTTTATAATCTC
12337 ATAATTG
1 ATAATTG
12344 NNNNNNNNNN
Statistics
Matches: 411, Mismatches: 93, Indels: 29
0.77 0.17 0.05
Matches are distributed among these distances:
169 7 0.02
170 202 0.49
171 191 0.46
172 11 0.03
ACGTcount: A:0.35, C:0.15, G:0.12, T:0.35
Consensus pattern (170 bp):
ATAATTGATTTGAAATTGAATTTTTTGACATTTTTGGTTAAAACAGACTATAATTGAATATCTAC
TTCAAGAAACGTGAAGAAAAAGGCATTCATTGCAAGAAAAGTCCATTTATAGTCACCCATTCCTT
CAAAAGCCTCATTACACGCTTTAAATTGTTTTATAATCTC
Found at i:15085 original size:170 final size:169
Alignment explanation
Indices: 14647--15245 Score: 470
Period size: 170 Copynumber: 3.5 Consensus size: 169
14637 TTTTGTAATC
* * * **
14647 TTTTAAATTGAATATTTTTACATTTTTTGGTTAAACAGACTA-AAATTGAATGTCTACCTCAAGA
1 TTTTAAGTTGAATTTTTTTATA-TTTTTGGTTAAACAGACTATAAA-TGAATGTCTACCTTGAGA
* * * *********** *
14711 AACATAAAGAAAAAGGTATTCATTGGGAAGAAAAGTTAATTTATAGTNNNNNNNNNNTTCATAAG
64 AACGT-AAGAAAAAGGCATTCATTGGGAAGAAAAGTCAATTTATAGTCACCCATTCCATCAAAAG
* * ** *
14776 -CCTTATTGCTCGCTTTAAATTTTTTTATAATCCCATAA-TGA
128 TCC-TATTACTTGCTTTAAATCGTTTTATAATCTCATAATTGA
* * *
14817 TTTTAAGTTGATTTTTTTTACATTTTTGGTTAAACAGACTATAAATGAATGTCTACCTTAAGAAA
1 TTTTAAGTTGAATTTTTTTATATTTTTGGTTAAACAGACTATAAATGAATGTCTACCTTGAGAAA
** **********
14882 CGTAAAGAAAAAGATATNNNNNNNNNNGAAAAGTCAATTTATCA-TCACCCATTCCATCAAAAG-
66 CGT-AAGAAAAAGGCATTCATTGGGAAGAAAAGTCAATTTAT-AGTCACCCATTCCATCAAAAGT
********** *
14945 CCTTATTACTTGCTTTAANNNNNNNNNNAATCTCATATTTGA
129 CC-TATTACTTGCTTTAAATCGTTTTATAATCTCATAATTGA
* * * *
14987 TTTTAAGTTGACTTTTTTTATATTTTTGGTTAAACAGACTATAATTGAATGTATCCCTTGAGAAA
1 TTTTAAGTTGAATTTTTTTATATTTTTGGTTAAACAGACTATAAATGAATGTCTACCTTGAGAAA
* * * **
15052 CATAAGGAAAAAGGCATTCATTGGGAAGAAAAGTCAATTTATAGTCGCTCATTCTTTCAAAAGTC
66 CGTAA-GAAAAAGGCATTCATTGGGAAGAAAAGTCAATTTATAGTCACCCATTCCATCAAAAGTC
* *
15117 CTATTGCTTGCTTTAAATCGTTTTATAATCTCATAATTAA
130 CTATTACTTGCTTTAAATCGTTTTATAATCTCATAATTGA
* * * *
15157 TTTTAAGTTAAATTTTTTTATATTTTTTGTTACAACAGACTATAAGTGATTGTCTACCTTGAGAA
1 TTTTAAGTTGAATTTTTTTATATTTTTGGTTA-AACAGACTATAAATGAATGTCTACCTTGAGAA
*
15222 ACGGGAAGAAAAAGGCATTCATTG
65 AC-GTAAGAAAAAGGCATTCATTG
15246 ANNNNNNNNN
Statistics
Matches: 333, Mismatches: 88, Indels: 15
0.76 0.20 0.03
Matches are distributed among these distances:
169 101 0.30
170 181 0.54
171 49 0.15
172 2 0.01
ACGTcount: A:0.34, C:0.12, G:0.13, T:0.37
Consensus pattern (169 bp):
TTTTAAGTTGAATTTTTTTATATTTTTGGTTAAACAGACTATAAATGAATGTCTACCTTGAGAAA
CGTAAGAAAAAGGCATTCATTGGGAAGAAAAGTCAATTTATAGTCACCCATTCCATCAAAAGTCC
TATTACTTGCTTTAAATCGTTTTATAATCTCATAATTGA
Found at i:23945 original size:170 final size:160
Alignment explanation
Indices: 23769--24077 Score: 345
Period size: 170 Copynumber: 1.9 Consensus size: 160
23759 AATCTCAAAA
* ** * *
23769 TTGA-TTTAGAGTTGAATTTTTTTACATTTGTGGTTAAAATAGACTATAATTGAATGCCTA-CAT
1 TTGATTTTA-AGTAGAATTTTTTTACATTTGTCATTAAAACAGACAATAATTGAATGCCTATC-T
* * *
23832 GGAGAAACTTGTA-AAAAAGTCATTCATTGAGAAGTAAAGTCCATTTATAGTCACCCATTCCTTC
64 GGAGAAAC-GGTAGAAAAAGTCATTCATTAAGAAGAAAAGTCCATTTATAGTCACCCATTCCTTC
*
23896 AAAAGTCTTATTGCTCACTGTAAATTGTCTTAT
128 AAAAGCCTTATTGCTCACTGTAAATTGTCTTAT
*
23929 NNNNNNNNNNTTGATTTTAAGTAGAATTTTTTTACATTTTTCATTAAAACAGACAATAATTGAAT
1 ----------TTGATTTTAAGTAGAATTTTTTTACATTTGTCATTAAAACAGACAATAATTGAAT
* * * * *
23994 TCCTATCTTGAGAAACGGTAGAAAATGTCATTTATTAAGAAGAAAAGTCCATTTATAGTCACCTA
56 GCCTATCTGGAGAAACGGTAGAAAAAGTCATTCATTAAGAAGAAAAGTCCATTTATAGTCACCCA
24059 TTCCTTCAAAAGCCTTATT
121 TTCCTTCAAAAGCCTTATT
24078 ACNNNNNNNN
Statistics
Matches: 121, Mismatches: 15, Indels: 6
0.85 0.11 0.04
Matches are distributed among these distances:
169 3 0.02
170 113 0.93
171 5 0.04
ACGTcount: A:0.34, C:0.13, G:0.13, T:0.37
Consensus pattern (160 bp):
TTGATTTTAAGTAGAATTTTTTTACATTTGTCATTAAAACAGACAATAATTGAATGCCTATCTGG
AGAAACGGTAGAAAAAGTCATTCATTAAGAAGAAAAGTCCATTTATAGTCACCCATTCCTTCAAA
AGCCTTATTGCTCACTGTAAATTGTCTTAT
Done.