Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398382.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1679.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1368

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
148--192
15
2.8
16
83
16
58
48
6
2
42
1.41
373--412
16
2.6
16
84
4
55
37
5
0
57
1.21
561--616
27
2.0
28
86
3
78
23
8
17
50
1.74
604--674
34
2.2
32
85
10
90
25
0
14
60
1.34

Tables:   1

The End!