Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398386.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1683.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5059

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
360--610
135
1.9
135
82
3
317
43
11
13
31
1.80
492--2583
171
12.2
171
77
6
1697
38
11
13
34
1.82
492--2583
343
6.1
342
76
6
1688
38
11
13
34
1.82
492--2583
514
4.1
515
79
6
1881
38
11
13
34
1.82
2860--3279
172
2.5
172
77
7
435
35
11
15
33
1.85
3361--3667
169
1.9
160
82
2
312
37
9
14
34
1.80

Tables:   1

The End!