Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398435.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1735.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16388

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1215
171
7.1
172
71
6
477
35
12
12
34
1.81
1629--2041
171
2.4
169
84
4
506
33
13
14
38
1.85
2151--3325
171
6.9
170
74
5
552
36
12
12
34
1.81
2675--3100
167
2.5
168
78
7
425
40
13
12
33
1.82
4396--6671
171
13.3
171
72
5
787
35
11
13
34
1.81
4380--6669
513
4.5
513
74
3
1346
35
11
12
34
1.81
4396--6667
342
6.6
340
73
4
1249
35
11
12
34
1.81
7256--8482
171
7.2
167
74
5
771
35
12
13
34
1.83
11194--11907
171
4.2
169
78
5
634
36
13
14
33
1.85
12660--12983
171
1.9
169
83
5
420
37
11
13
37
1.81
12666--13065
171
2.3
171
79
6
411
37
11
13
38
1.80
13247--13990
170
4.4
171
78
4
646
36
10
13
35
1.80
14243--15506
171
7.4
170
81
3
1247
36
13
14
36
1.84
14243--15506
340
3.7
339
81
5
1318
36
13
14
36
1.84
15741--16100
172
2.1
171
80
1
389
36
12
12
36
1.81

Tables:   1

The End!