Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398437.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1737.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13149

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--308
170
1.8
170
81
5
390
38
12
12
36
1.81
1001--1039
18
2.0
20
85
9
55
53
5
7
33
1.51
754--2105
171
7.9
171
77
5
1121
37
11
14
35
1.82
492--2091
678
2.4
668
79
5
1604
38
11
14
35
1.82
2872--3322
170
2.6
170
79
4
476
39
11
13
36
1.80
3657--4533
172
5.1
170
76
4
676
39
11
14
34
1.83
6357--7836
515
2.9
509
85
3
1762
38
11
14
35
1.82
6123--7845
172
10.1
172
75
5
1136
38
11
14
34
1.82
9567--10659
172
6.4
171
74
5
776
38
11
12
35
1.80
9976--10338
169
2.1
172
78
8
386
39
11
12
36
1.80
11555--13147
170
9.3
171
76
6
1369
38
11
13
36
1.82
11555--13147
514
3.1
509
79
6
1598
38
11
13
36
1.82
11562--13147
344
4.6
339
77
6
1047
38
11
13
36
1.82
11561--13149
685
2.3
684
78
6
1549
38
11
13
36
1.82

Tables:   1

The End!