Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398470.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1767.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21649

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4017--4296
148
1.9
150
83
3
368
35
12
13
38
1.83
6477--7138
341
2.0
332
81
2
695
34
14
14
32
1.86
6289--7138
171
5.0
170
74
3
650
35
13
14
32
1.85
7624--8191
172
3.3
171
84
4
675
35
15
13
36
1.86
8345--9373
172
6.1
171
83
3
1166
33
15
12
38
1.85
13902--14548
170
3.8
168
76
5
548
38
12
13
33
1.84
14397--14691
149
2.0
149
91
0
484
35
12
14
37
1.84
14545--15052
172
3.0
170
83
3
651
34
12
15
37
1.86
15229--15804
172
3.4
169
85
5
757
40
12
12
34
1.81
16121--16462
171
2.0
171
80
1
389
35
11
14
35
1.82
17433--17882
171
2.6
172
78
4
435
36
11
14
33
1.81
18599--19180
172
3.4
157
75
12
412
33
11
16
33
1.84

Tables:   1

The End!