Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398472.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1769.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8256

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1014
171
5.9
168
74
5
656
37
11
12
34
1.80
392--725
169
2.0
161
73
14
316
41
11
11
33
1.77
1264--1637
176
2.1
175
83
3
475
38
10
13
37
1.79
1312--1800
176
2.8
176
80
4
494
39
11
12
36
1.79
2326--2709
171
2.2
171
83
6
492
41
11
12
34
1.80
2813--4555
170
10.2
171
74
7
1249
38
13
13
34
1.83
4580--5439
170
5.1
169
78
6
778
37
12
14
35
1.85
4184--5019
459
1.8
459
84
2
1133
37
13
13
36
1.84
4580--5439
171
5.1
167
79
7
842
37
12
14
35
1.85
4580--5441
335
2.5
334
80
6
925
37
12
14
35
1.85
7180--7562
199
1.9
201
81
8
460
36
14
14
34
1.86
7002--7735
370
2.0
371
80
6
828
36
14
12
36
1.84
7367--8250
342
2.6
337
80
6
962
35
13
12
38
1.83
7367--8251
171
5.2
169
79
8
843
35
13
12
37
1.83

Tables:   1

The End!