Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398491.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1786.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5021

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1323--1705
171
2.2
171
82
5
436
34
12
14
38
1.84
1484--1937
232
2.0
222
83
3
484
34
10
13
39
1.79
1716--2517
171
4.7
170
82
4
798
35
13
13
37
1.84
1716--2517
342
2.3
342
82
4
947
35
13
13
37
1.84
3266--3386
64
1.9
64
83
6
156
33
19
7
39
1.80
3094--3556
234
2.0
234
81
5
544
33
15
11
39
1.84
3328--3782
171
2.7
167
80
6
493
33
13
10
42
1.79
3512--3841
171
1.9
171
82
6
409
35
12
11
40
1.79
4010--4130
64
1.9
64
82
3
154
39
6
20
33
1.79

Tables:   1

The End!