Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398493.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1788.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5859

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
125--526
172
2.4
165
78
9
415
37
11
13
38
1.80
1116--1536
171
2.5
171
77
9
412
38
10
14
36
1.80
2531--3111
171
3.4
171
74
4
393
36
12
12
34
1.82
3898--4219
170
1.9
162
84
5
348
38
11
11
35
1.78
5013--5346
171
2.0
170
85
4
449
35
11
14
37
1.83

Tables:   1

The End!