Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018398530.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1823.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 628

Length: 1047
ACGTcount: A:0.22, C:0.08, G:0.10, T:0.21

Warning! 405 characters in sequence are not A, C, G, or T


Found at i:799 original size:15 final size:15

Alignment explanation


    Indices: 776--806  Score: 53
    Period size: 15  Copynumber: 2.1  Consensus size: 15

        766 CAAATATCTT

                           
        776 TGGTCATTATTATTA
          1 TGGTCATTATTATTA

                *          
        791 TGGTTATTATTATTA
          1 TGGTCATTATTATTA

             
        806 T
          1 T

        807 TATTATTGTC


Statistics
Matches: 15,  Mismatches: 1, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
  15   15  1.00

ACGTcount: A:0.26, C:0.03, G:0.13, T:0.58


Consensus pattern (15 bp):   
TGGTCATTATTATTA
Done.