Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397381.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_589.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32778

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6428--7413
171
5.8
170
76
5
792
39
12
12
34
1.81
6428--7413
342
2.9
340
77
6
920
39
12
12
34
1.81
16262--16569
170
1.9
160
81
2
296
35
11
12
37
1.80
20206--20536
171
2.0
161
73
8
191
34
13
10
41
1.80
20945--22095
342
3.4
341
76
4
836
34
13
12
38
1.82
20959--22095
171
6.7
169
72
4
700
34
13
11
38
1.81
24817--25750
170
5.5
169
80
5
920
34
14
11
40
1.81
24814--25750
341
2.7
339
83
5
1056
34
14
11
40
1.81
26144--26453
170
1.8
169
85
2
433
39
10
12
36
1.79
26823--29304
171
14.5
170
73
6
1576
38
11
13
33
1.81
26824--29285
343
7.2
337
75
7
1619
38
11
13
33
1.81
26823--29304
853
2.9
852
79
4
2159
38
11
13
33
1.81
29352--30727
171
8.0
170
77
6
1174
38
11
13
36
1.81
29344--30728
514
2.7
509
85
3
1762
38
11
13
35
1.81
30862--32764
171
11.2
170
75
6
1260
38
11
13
34
1.81
30862--32764
342
5.6
339
78
4
1503
38
11
13
34
1.81

Tables:   1

The End!