Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398535.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1828.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5577

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1483
171
8.7
170
79
3
1390
37
12
13
34
1.84
1--1483
340
4.3
342
79
4
1479
37
12
13
34
1.84
1--1483
511
2.9
507
79
4
1472
37
12
13
34
1.84
1503--2023
171
3.1
169
80
4
541
36
12
13
34
1.83

Tables:   1

The End!