Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398671.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1957.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8479

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
982--1341
171
2.1
171
80
0
425
32
9
12
40
1.75
1358--1818
170
2.7
168
79
3
494
37
14
9
36
1.79
3862--4179
171
1.9
169
84
2
431
34
15
11
38
1.84
3533--4691
172
6.8
170
75
4
805
35
13
10
37
1.79
3922--4599
343
2.0
330
77
6
655
35
13
10
37
1.79
6134--6466
171
2.0
161
75
8
292
36
12
11
33
1.79
6312--6635
170
2.0
159
80
9
291
37
12
11
34
1.81
7379--7428
21
2.4
21
89
0
73
24
20
18
38
1.93
7681--8066
170
2.3
171
80
3
438
39
11
14
35
1.82

Tables:   1

The End!