Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397395.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1097.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26056

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3545--4023
171
2.8
171
78
3
370
36
10
10
37
1.75
7742--7941
104
2.0
94
79
12
206
45
3
9
37
1.53
10695--11514
171
4.8
170
76
2
673
35
11
13
34
1.81
12551--13440
171
5.2
169
78
4
815
36
11
13
35
1.81
12551--13440
342
2.6
340
79
4
912
36
11
13
35
1.81
13818--14149
171
2.0
160
79
10
348
34
11
14
37
1.82
16210--17151
171
5.5
170
73
3
690
34
14
11
34
1.83
19222--19548
170
1.9
171
81
3
399
37
11
10
37
1.76
21634--21958
170
2.0
161
82
4
325
35
14
14
32
1.86
23365--23991
343
1.9
331
79
4
696
36
10
13
34
1.80
23534--23871
171
2.0
161
82
7
390
37
10
12
36
1.77
24186--24496
171
1.8
172
83
3
412
38
11
13
36
1.80
24604--26056
170
8.5
170
69
7
650
36
11
12
33
1.79
25227--26045
340
2.4
335
79
5
813
36
11
11
35
1.79

Tables:   1

The End!