Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398675.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1960.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10582

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
975--1377
172
2.3
170
74
5
398
34
15
12
34
1.85
3551--4252
172
4.1
172
73
7
609
34
12
13
34
1.83
4958--5975
172
5.9
172
79
4
1032
35
14
12
37
1.84
6081--6561
172
2.8
171
79
5
463
33
12
14
37
1.83
6428--6693
131
2.0
132
84
3
349
30
13
17
38
1.88
7990--8378
172
2.3
171
80
4
397
37
11
13
33
1.81
8506--8824
171
1.9
169
84
5
428
39
13
14
32
1.85

Tables:   1

The End!