Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398724.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2008.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9558

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2877--3644
171
4.5
171
75
5
469
34
13
12
35
1.82
4412--5141
172
4.3
171
78
4
695
37
14
12
35
1.85
4412--5143
344
2.1
339
81
4
853
37
14
12
35
1.84
7567--7882
171
1.8
172
81
6
399
36
14
13
35
1.86
7956--9558
343
4.7
341
73
1
1266
33
14
11
33
1.82
7958--9033
171
6.3
169
72
5
575
34
15
11
34
1.83
7958--9258
171
7.6
170
69
6
557
33
15
11
33
1.83
7956--9558
686
2.3
686
82
0
1837
33
14
11
33
1.82

Tables:   1

The End!