Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018398757.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_204.1, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 6839
ACGTcount: A:0.31, C:0.19, G:0.18, T:0.32

Warning! 100 characters in sequence are not A, C, G, or T


Found at i:1441 original size:2 final size:2

Alignment explanation


    Indices: 1429--1459  Score: 53
    Period size: 2  Copynumber: 15.5  Consensus size: 2

       1419 TTGAGTTAAT

                     *                                    
       1429 TA TA TA CA TA TA TA TA TA TA TA TA TA TA TA T
          1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T

       1460 GTAAATTGAG


Statistics
Matches: 27,  Mismatches: 2, Indels: 0
        0.93            0.07        0.00

Matches are distributed among these distances:
   2   27  1.00

ACGTcount: A:0.48, C:0.03, G:0.00, T:0.48


Consensus pattern (2 bp):   
TA

Done.